31 | | In LIMS job submission happens in stages. In the first stage everything related to the data itself is collected and placed into a tar file. This includes the scan data itself, the edit profile, analysis parameters, and any noise files that have been selected. In the second stage, the job submission parameters are placed into a job submit file and the job is submitted. It is submitted as an HTTP request, where the job submission xml file is the body of the request and the tar file is sent as a base-64 encoded, chunk-split attachment. LIMS writes the parent HPCAnalysisRequest record in the LIMS database, as well as the analysis record for the job in the local gfac database, which contains the jobs from all the LIMS databases that are currently being processed. |
| 31 | In LIMS job submission happens in stages. In the first stage everything related to the data itself is collected and placed into a tar file. This includes the scan data itself, the edit profile, analysis parameters, and any noise files that have been selected. In the second stage, the job submission parameters are placed into a job submit file and the job is submitted. It is submitted as an HTTP request, where the job submission xml file is the body of the request and the tar file is sent as a base-64 encoded, chunk-split attachment. LIMS writes the parent HPCAnalysisRequest record in the LIMS database, as well as the analysis record for the job in the local gfac database. The analysis table in the local gfac database contains the jobs from all the LIMS databases that are currently being processed. |