Changes between Version 6 and Version 7 of Caveats


Ignore:
Timestamp:
Dec 17, 2010 9:00:39 PM (9 years ago)
Author:
emre
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • Caveats

    v6 v7  
    11= Caveats =
    22
     3== static regions may shift ==
    34Note that the static region in a pdb might move from your original reference pdb.
    45
     
    2526}}}
    2627
     28== multichain residue numbers get resequenced ==
     29
     30Residues are renumbered by DMD starting at 1.
     31
     32This numbering continues, even though there may be multiple chains.
     33
     34We prefer to number each chain starting at 1.
     35
     36To this end, I have developed the following routine:
     37|| program || purpose || arguments || comments ||
     38|| pdb_reseq_residue.pl || renumbers all chains starting at 1 || pdbs || this modifies pdbs in-place, so make sure you have a backup ||
     39