[1] | 1 | <?php
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| 2 |
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[18] | 3 | $us3bin = exec( "ls -d ~us3/lims/bin" );
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[6] | 4 | include "$us3bin/listen-config.php";
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[25] | 5 | include "$class_dir/experiment_status.php";
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[1] | 6 |
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| 7 | write_log( "$self: Starting" );
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| 8 |
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| 9 | $handle = fopen( $pipe, "r+" );
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| 10 |
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| 11 | if ( $handle == NULL )
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| 12 | {
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| 13 | write_log( "$self: Cannot open pipe" );
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| 14 | exit( -1 );
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| 15 | }
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| 16 |
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| 17 | $msg = "";
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| 18 |
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| 19 | // From a pipe, we don't know when the message terminates, so the sender
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| 20 | // added a null to indicate the end of each message
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| 21 | do
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| 22 | {
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| 23 | $input = fgetc( $handle ); // Read one character at a time
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| 24 | $msg .= $input;
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| 25 |
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| 26 | if ( $input[ 0 ] == chr( 0 ) )
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| 27 | {
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| 28 | // Go do some work
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| 29 | $msg = rtrim( $msg );
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| 30 | if ( $msg == "Stop listen" ) break;
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| 31 | process( $msg );
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| 32 | write_log( "$self: $msg" );
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| 33 | $msg = "";
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| 34 | }
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| 35 | } while ( true );
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| 36 |
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| 37 | write_log( "$self: Stopping" );
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| 38 | exit();
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| 39 |
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| 40 | // The format of the messages would be
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| 41 | // db-requestID: message ( colon-space )
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| 42 | function process( $msg )
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| 43 | {
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| 44 | global $dbhost;
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| 45 | global $user;
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| 46 | global $passwd;
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[3] | 47 | global $self;
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[1] | 48 |
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| 49 | $list = explode( ": ", $msg );
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| 50 | list( $db, $requestID ) = explode( "-", array_shift( $list ) );
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| 51 | $message = implode( ": ", $list );
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| 52 |
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| 53 | // Convert to integer
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| 54 | settype( $requestID, 'integer' );
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| 55 |
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| 56 | // We need the gfacID
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| 57 | $resource = mysql_connect( $dbhost, $user, $passwd );
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| 58 |
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| 59 | if ( ! $resource )
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| 60 | {
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[3] | 61 | write_log( "$self process(): Could not connect to MySQL - " . mysql_error() );
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[1] | 62 | write_log( "$self process(): original msg - $msg" );
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| 63 | return;
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| 64 | }
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| 65 |
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| 66 | if ( ! mysql_select_db( $db, $resource ) )
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| 67 | {
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[26] | 68 | write_log( "$self: Could not select DB $db " . mysql_error( $resource ) );
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[1] | 69 | write_log( "$self process(): original msg - $msg" );
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| 70 | return;
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| 71 | }
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| 72 |
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| 73 | $query = "SELECT gfacID FROM HPCAnalysisResult " .
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| 74 | "WHERE HPCAnalysisRequestID=$requestID " .
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| 75 | "ORDER BY HPCAnalysisResultID DESC " .
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| 76 | "LIMIT 1";
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| 77 |
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| 78 | $result = mysql_query( $query, $resource );
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| 79 |
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| 80 | if ( ! $result )
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| 81 | {
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| 82 | write_log( "$self process(): Bad query: $query" );
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| 83 | write_log( "$self process(): original msg - $msg" );
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| 84 | return;
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| 85 | }
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| 86 |
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[6] | 87 | // Set flags for Airavata/Thrift and "Finished..."
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[1] | 88 | list( $gfacID ) = mysql_fetch_row( $result );
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| 89 | mysql_close( $resource );
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| 90 |
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[10] | 91 | $is_athrift = preg_match( "/^US3-A/i", $gfacID );
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[6] | 92 | $is_finished = preg_match( "/^Finished/i", $message );
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[1] | 93 |
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[6] | 94 | if ( $is_athrift )
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| 95 | { // Process submitted thru Airavata/Thrift
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| 96 | if ( $is_finished )
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| 97 | { // Message is "Finished..." : Update message and status
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| 98 | write_log( "$self process(): Thrift + Finished" );
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| 99 | update_db( $db, $requestID, 'finished', $message );
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| 100 | update_aira( $gfacID, $message ); // wait for Airvata to deposit data
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| 101 | }
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| 102 | else
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| 103 | { // Other messages : just update message
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| 104 | //write_log( "$self process(): Thrift, NOT Finished" );
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| 105 | $updmsg = 'update';
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| 106 | if ( preg_match( "/^Starting/i", $message ) )
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| 107 | $updmsg = 'starting';
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| 108 | if ( preg_match( "/^Abort/i", $message ) )
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| 109 | $updmsg = 'aborted';
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| 110 |
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| 111 | update_db( $db, $requestID, $updmsg, $message );
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| 112 | update_gfac( $gfacID, "UPDATING", $message );
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| 113 | }
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[1] | 114 | }
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| 115 |
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[6] | 116 | else
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| 117 | { // Not Airavata/Thrift
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| 118 | if ( $is_finished )
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| 119 | { // Handle "Finished..." message
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| 120 | $hex = "[0-9a-fA-F]";
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[1] | 121 |
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[6] | 122 | if ( preg_match( "/^US3-Experiment/i", $gfacID ) ||
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| 123 | preg_match( "/^US3-$hex{8}-$hex{4}-$hex{4}-$hex{4}-$hex{12}$/", $gfacID ) )
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| 124 | {
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| 125 | // Then it's a GFAC job
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| 126 | update_db( $db, $requestID, 'finished', $message );
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| 127 | update_gfac( $gfacID, "UPDATING", $message ); // wait for GFAC to deposit data
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| 128 | notify_gfac_done( $gfacID ); // notify them to go get it
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| 129 | }
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| 130 |
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| 131 | else
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| 132 | {
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| 133 | // It's a local job
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| 134 | update_db( $db, $requestID, 'finished', $message );
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| 135 | update_gfac( $gfacID, "COMPLETE", $message ); // data should be there already
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| 136 | }
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| 137 | }
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| 138 |
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| 139 | else if ( preg_match( "/^Starting/i", $message ) )
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[1] | 140 | {
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[6] | 141 | update_db( $db, $requestID, 'starting', $message );
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| 142 | update_gfac( $gfacID, "RUNNING", $message );
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[1] | 143 | }
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| 144 |
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[6] | 145 | else if ( preg_match( "/^Abort/i", $message ) )
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| 146 | {
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| 147 | update_db( $db, $requestID, 'aborted', $message );
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| 148 | update_gfac( $gfacID, "CANCELED", $message );
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| 149 | }
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| 150 |
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[1] | 151 | else
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| 152 | {
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[6] | 153 | update_db( $db, $requestID, 'update', $message );
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| 154 | update_gfac( $gfacID, "UPDATING", $message );
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[1] | 155 | }
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| 156 | }
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| 157 | }
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| 158 |
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| 159 | function update_db( $db, $requestID, $action, $message )
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| 160 | {
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| 161 | global $dbhost;
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| 162 | global $user;
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| 163 | global $passwd;
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| 164 | global $self;
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| 165 |
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| 166 | $resource = mysql_connect( $dbhost, $user, $passwd );
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| 167 |
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| 168 | if ( ! $resource )
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| 169 | {
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| 170 | write_log( "$self: Could not connect to DB" );
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| 171 | return;
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| 172 | }
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| 173 |
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| 174 | if ( ! mysql_select_db( $db, $resource ) )
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| 175 | {
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[26] | 176 | write_log( "$self: Could not select DB $db " . mysql_error( $resource ) );
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[1] | 177 | return;
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| 178 | }
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| 179 |
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| 180 | $query = "SELECT HPCAnalysisResultID FROM HPCAnalysisResult " .
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| 181 | "WHERE HPCAnalysisRequestID=$requestID " .
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| 182 | "ORDER BY HPCAnalysisResultID DESC " .
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| 183 | "LIMIT 1";
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| 184 |
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| 185 | $result = mysql_query( $query, $resource );
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| 186 |
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| 187 | if ( ! $result )
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| 188 | {
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| 189 | write_log( "$self: Bad query: $query" );
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| 190 | return;
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| 191 | }
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| 192 |
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| 193 | list( $resultID ) = mysql_fetch_row( $result );
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| 194 |
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| 195 | $query = "UPDATE HPCAnalysisResult SET ";
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| 196 |
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| 197 | switch ( $action )
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| 198 | {
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| 199 | case "starting":
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| 200 | $query .= "queueStatus='running'," .
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| 201 | "startTime=now(), ";
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| 202 | break;
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| 203 |
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| 204 | case "aborted":
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| 205 | $query .= "queueStatus='aborted'," .
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| 206 | "endTime=now(), ";
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| 207 | break;
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| 208 |
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| 209 | case "finished":
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| 210 | $query .= "queueStatus='completed'," .
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| 211 | "endTime=now(), ";
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[6] | 212 | //write_log( "$self process(): $requestID : dbupd : Finished" );
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[1] | 213 | break;
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| 214 |
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[6] | 215 | case "update":
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| 216 | //write_log( "$self process(): $requestID : dbupd : update" );
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[1] | 217 | default:
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| 218 | break;
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| 219 | }
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| 220 |
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| 221 | $query .= "lastMessage='" . mysql_real_escape_string( $message ) . "'" .
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| 222 | "WHERE HPCAnalysisResultID=$resultID";
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| 223 |
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| 224 | mysql_query( $query, $resource );
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| 225 | mysql_close( $resource );
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| 226 | }
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| 227 |
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| 228 | // Function to update the global database status
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| 229 | function update_gfac( $gfacID, $status, $message )
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| 230 | {
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| 231 | global $dbhost;
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| 232 | global $guser;
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| 233 | global $gpasswd;
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| 234 | global $gDB;
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| 235 | global $self;
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| 236 |
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| 237 | $allowed_status = array( 'RUNNING',
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| 238 | 'UPDATING',
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| 239 | 'CANCELED',
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| 240 | 'COMPLETE'
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| 241 | );
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| 242 |
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| 243 | // Get data from global GFAC DB
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| 244 | $gLink = mysql_connect( $dbhost, $guser, $gpasswd );
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| 245 | if ( ! mysql_select_db( $gDB, $gLink ) )
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| 246 | {
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[26] | 247 | write_log( "$self: Could not select DB $gDB " . mysql_error( $gLink ) );
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[1] | 248 | return;
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| 249 | }
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| 250 |
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| 251 | $status = strtoupper( $status );
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| 252 | if ( ! in_array( $status, $allowed_status ) )
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| 253 | {
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| 254 | write_log( "$self: update_gfac status $status not allowed" );
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| 255 | return;
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| 256 | }
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| 257 |
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| 258 | // if 'UPDATING' then we're only updating the queue_messages table
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[6] | 259 | if ( $status == 'UPDATING' )
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[1] | 260 | {
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[6] | 261 | $query = "UPDATE analysis " .
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| 262 | "SET queue_msg='" . mysql_real_escape_string( $message ) . "' " .
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[1] | 263 | "WHERE gfacID='$gfacID'";
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| 264 |
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[6] | 265 | //write_log( "$self process(): updgf-u : status=$status" );
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[1] | 266 | mysql_query( $query, $gLink );
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| 267 | }
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| 268 |
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[6] | 269 | else
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| 270 | {
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| 271 | $query = "UPDATE analysis SET status='$status', " .
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| 272 | "queue_msg='" . mysql_real_escape_string( $message ) . "' " .
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| 273 | "WHERE gfacID='$gfacID'";
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| 274 |
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| 275 | //write_log( "$self process(): updgf-s : status=$status" );
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| 276 | mysql_query( $query, $gLink );
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| 277 | }
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| 278 |
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[1] | 279 | // Also update the queue_messages table
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| 280 | $query = "SELECT id FROM analysis " .
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| 281 | "WHERE gfacID = '$gfacID'";
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| 282 | $result = mysql_query( $query, $gLink );
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| 283 | if ( ! $result )
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| 284 | {
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| 285 | write_log( "$self: bad query: $query " . mysql_error( $gLink ) );
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| 286 | return;
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| 287 | }
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| 288 |
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| 289 | if ( mysql_num_rows( $result ) == 0 )
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| 290 | {
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| 291 | write_log( "$self: can't find $gfacID in GFAC db" );
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| 292 | return;
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| 293 | }
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| 294 |
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| 295 | list( $aID ) = mysql_fetch_array( $result );
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| 296 |
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| 297 | $query = "INSERT INTO queue_messages " .
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| 298 | "SET analysisID = $aID, " .
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| 299 | "message = '" . mysql_real_escape_string( $message ) . "'";
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| 300 | $result = mysql_query( $query, $gLink );
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| 301 | if ( ! $result )
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| 302 | {
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| 303 | write_log( "$self: bad query: $query " . mysql_error( $gLink ) );
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| 304 | return;
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| 305 | }
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| 306 |
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| 307 | mysql_close( $gLink );
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| 308 | }
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| 309 |
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| 310 | // function to notify GFAC that the UDP message "Finished" has arrived
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| 311 | function notify_gfac_done( $gfacID )
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| 312 | {
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| 313 | global $serviceURL;
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[6] | 314 | global $self;
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[1] | 315 |
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| 316 | $hex = "[0-9a-fA-F]";
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| 317 | if ( ! preg_match( "/^US3-Experiment/i", $gfacID ) &&
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| 318 | ! preg_match( "/^US3-$hex{8}-$hex{4}-$hex{4}-$hex{4}-$hex{12}$/", $gfacID ) )
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| 319 | {
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| 320 | // Then it's not a GFAC job
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| 321 | return false;
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| 322 | }
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| 323 |
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| 324 | $url = "$serviceURL/setstatus/$gfacID";
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| 325 | try
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| 326 | {
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| 327 | $post = new HttpRequest( $url, HttpRequest::METH_GET );
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| 328 | $http = $post->send();
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| 329 | $xml = $post->getResponseBody();
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| 330 | }
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| 331 | catch ( HttpException $e )
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| 332 | {
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| 333 | write_log( "$self: Set status unsuccessful - $gfacID" );
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| 334 | return false;
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| 335 | }
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| 336 |
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| 337 | // Parse the result
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| 338 | // Not sure we need to know $gfac_status = parse_response( $xml );
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| 339 |
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| 340 | // return $gfac_status;
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| 341 |
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| 342 | return true;
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| 343 | }
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[6] | 344 |
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| 345 | // Function to update the global database status (AThrift + Finished)
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| 346 | function update_aira( $gfacID, $message )
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| 347 | {
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| 348 | global $dbhost;
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| 349 | global $guser;
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| 350 | global $gpasswd;
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| 351 | global $gDB;
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| 352 | global $self;
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| 353 |
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| 354 | // Get data from global GFAC DB
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| 355 | $gLink = mysql_connect( $dbhost, $guser, $gpasswd );
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| 356 | if ( ! mysql_select_db( $gDB, $gLink ) )
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| 357 | {
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[26] | 358 | write_log( "$self: Could not select DB $gDB " . mysql_error( $gLink ) );
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[6] | 359 | return;
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| 360 | }
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| 361 |
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| 362 | // Update message and update status to 'FINISHED'
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| 363 | $query = "UPDATE analysis SET status='FINISHED', " .
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| 364 | "queue_msg='" . mysql_real_escape_string( $message ) . "' " .
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| 365 | "WHERE gfacID='$gfacID'";
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| 366 |
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| 367 | mysql_query( $query, $gLink );
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| 368 | write_log( "$self: Status FINISHED and 'Finished...' message updated" );
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| 369 |
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| 370 | // Also update the queue_messages table
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| 371 | $query = "SELECT id FROM analysis " .
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| 372 | "WHERE gfacID = '$gfacID'";
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| 373 | $result = mysql_query( $query, $gLink );
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| 374 | if ( ! $result )
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| 375 | {
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| 376 | write_log( "$self: bad query: $query " . mysql_error( $gLink ) );
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| 377 | return;
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| 378 | }
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| 379 |
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| 380 | if ( mysql_num_rows( $result ) == 0 )
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| 381 | {
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| 382 | // write_log( "$self: can't find $gfacID in GFAC db" );
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| 383 | return;
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| 384 | }
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| 385 |
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| 386 | list( $aID ) = mysql_fetch_array( $result );
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| 387 |
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| 388 | $query = "INSERT INTO queue_messages " .
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| 389 | "SET analysisID = $aID, " .
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| 390 | "message = '" . mysql_real_escape_string( $message ) . "'";
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| 391 | $result = mysql_query( $query, $gLink );
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| 392 | if ( ! $result )
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| 393 | {
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| 394 | write_log( "$self: bad query: $query " . mysql_error( $gLink ) );
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| 395 | return;
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| 396 | }
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| 397 |
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| 398 | mysql_close( $gLink );
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| 399 | }
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[1] | 400 | ?>
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